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Cluster: HRGMv2_0674_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0674_123 HRGMv2_0674_123_1 400 1926 - GH13_36
TC HRGMv2_0674_123 HRGMv2_0674_123_2 2245 3096 - 3.A.1.1.27
TC HRGMv2_0674_123 HRGMv2_0674_123_3 3093 4565 - 3.A.1.1.27
Gene ID: HRGMv2_0674_123_1
Type: CAZyme
Location: 400 - 1926 (-)
Gene ID: HRGMv2_0674_123_2
Type: TC
Location: 2245 - 3096 (-)
Gene ID: HRGMv2_0674_123_3
Type: TC
Location: 3093 - 4565 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0674_123_2 vegetarian > vegan 1.08458 0.00229

🧭 Explore Read Mapping of CGC

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