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Cluster: HRGMv2_0674_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0674_114 HRGMv2_0674_114_3 1633 3435 + GH146
TC HRGMv2_0674_114 HRGMv2_0674_114_4 3459 4373 + 3.A.1.1.7
TC HRGMv2_0674_114 HRGMv2_0674_114_5 4387 5232 + 3.A.1.1.34
STP HRGMv2_0674_114 HRGMv2_0674_114_6 5332 6663 + SBP_bac_1
CAZyme HRGMv2_0674_114 HRGMv2_0674_114_7 6788 8296 + GH51_1
Gene ID: HRGMv2_0674_114_3
Type: CAZyme
Location: 1633 - 3435 (+)
Gene ID: HRGMv2_0674_114_4
Type: TC
Location: 3459 - 4373 (+)
Gene ID: HRGMv2_0674_114_5
Type: TC
Location: 4387 - 5232 (+)
Gene ID: HRGMv2_0674_114_6
Type: STP
Location: 5332 - 6663 (+)
Gene ID: HRGMv2_0674_114_7
Type: CAZyme
Location: 6788 - 8296 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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