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Cluster: HRGMv2_0674_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0674_56 HRGMv2_0674_56_4 2282 3571 - GH125
pfam HRGMv2_0674_56 HRGMv2_0674_56_5 4533 5450 - DHDPS
CAZyme HRGMv2_0674_56 HRGMv2_0674_56_6 5511 7346 - GH143
TF HRGMv2_0674_56 HRGMv2_0674_56_7 7557 9869 - HTH_AraC
STP HRGMv2_0674_56 HRGMv2_0674_56_8 10331 11860 - SBP_bac_1
TC HRGMv2_0674_56 HRGMv2_0674_56_9 11996 12913 - 3.A.1.1.29
TC HRGMv2_0674_56 HRGMv2_0674_56_10 12927 13868 - 3.A.1.1.10
Gene ID: HRGMv2_0674_56_4
Type: CAZyme
Location: 2282 - 3571 (-)
Gene ID: HRGMv2_0674_56_5
Type: pfam
Location: 4533 - 5450 (-)
Gene ID: HRGMv2_0674_56_6
Type: CAZyme
Location: 5511 - 7346 (-)
Gene ID: HRGMv2_0674_56_7
Type: TF
Location: 7557 - 9869 (-)
Gene ID: HRGMv2_0674_56_8
Type: STP
Location: 10331 - 11860 (-)
Gene ID: HRGMv2_0674_56_9
Type: TC
Location: 11996 - 12913 (-)
Gene ID: HRGMv2_0674_56_10
Type: TC
Location: 12927 - 13868 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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