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Cluster: HRGMv2_0674_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0674_6 HRGMv2_0674_6_2 751 2640 - 3.A.9.1.2
TC HRGMv2_0674_6 HRGMv2_0674_6_3 2964 4490 - 2.A.66.1.40
CAZyme HRGMv2_0674_6 HRGMv2_0674_6_4 4521 5486 - GT2
CAZyme HRGMv2_0674_6 HRGMv2_0674_6_5 5510 6562 - GT2
pfam HRGMv2_0674_6 HRGMv2_0674_6_6 6559 7737 - Radical_SAM | SPASM
CAZyme HRGMv2_0674_6 HRGMv2_0674_6_7 7770 8972 - GT4
pfam HRGMv2_0674_6 HRGMv2_0674_6_8 8977 9882 - DUF6625
CAZyme HRGMv2_0674_6 HRGMv2_0674_6_9 9879 11039 - GT4
Gene ID: HRGMv2_0674_6_2
Type: TC
Location: 751 - 2640 (-)
Gene ID: HRGMv2_0674_6_3
Type: TC
Location: 2964 - 4490 (-)
Gene ID: HRGMv2_0674_6_4
Type: CAZyme
Location: 4521 - 5486 (-)
Gene ID: HRGMv2_0674_6_5
Type: CAZyme
Location: 5510 - 6562 (-)
Gene ID: HRGMv2_0674_6_6
Type: pfam
Location: 6559 - 7737 (-)
Gene ID: HRGMv2_0674_6_7
Type: CAZyme
Location: 7770 - 8972 (-)
Gene ID: HRGMv2_0674_6_8
Type: pfam
Location: 8977 - 9882 (-)
Gene ID: HRGMv2_0674_6_9
Type: CAZyme
Location: 9879 - 11039 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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