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Cluster: HRGMv2_0674_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0674_48 HRGMv2_0674_48_4 3336 4337 - GT8
CAZyme HRGMv2_0674_48 HRGMv2_0674_48_5 4521 6044 + GH13_44
pfam HRGMv2_0674_48 HRGMv2_0674_48_6 6673 7659 - NMT1 | NMT1_2
TC HRGMv2_0674_48 HRGMv2_0674_48_7 7857 8669 - 3.A.1.17.3
TC HRGMv2_0674_48 HRGMv2_0674_48_8 8666 9445 - 3.A.1.17.8
TC HRGMv2_0674_48 HRGMv2_0674_48_9 9987 10310 - 2.A.78.1.1
TC HRGMv2_0674_48 HRGMv2_0674_48_10 10307 11017 - 2.A.78.1.1
Gene ID: HRGMv2_0674_48_4
Type: CAZyme
Location: 3336 - 4337 (-)
Gene ID: HRGMv2_0674_48_5
Type: CAZyme
Location: 4521 - 6044 (+)
Gene ID: HRGMv2_0674_48_6
Type: pfam
Location: 6673 - 7659 (-)
Gene ID: HRGMv2_0674_48_7
Type: TC
Location: 7857 - 8669 (-)
Gene ID: HRGMv2_0674_48_8
Type: TC
Location: 8666 - 9445 (-)
Gene ID: HRGMv2_0674_48_9
Type: TC
Location: 9987 - 10310 (-)
Gene ID: HRGMv2_0674_48_10
Type: TC
Location: 10307 - 11017 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0674_48_7 vegetarian > vegan 1.44328 0.00229

🧭 Explore Read Mapping of CGC

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