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Cluster: HRGMv2_0674_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0674_44 HRGMv2_0674_44_1 610 1806 - 2.A.1.46.5
CAZyme HRGMv2_0674_44 HRGMv2_0674_44_2 1810 3507 - CE1
TC HRGMv2_0674_44 HRGMv2_0674_44_3 3531 4412 - 3.A.1.1.10
TC HRGMv2_0674_44 HRGMv2_0674_44_4 4431 5333 - 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_0674_44 HRGMv2_0674_44_5 5349 5627 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0674_44 HRGMv2_0674_44_6 5599 7881 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0674_44 HRGMv2_0674_44_7 8344 9153 + CE1
Gene ID: HRGMv2_0674_44_1
Type: TC
Location: 610 - 1806 (-)
Gene ID: HRGMv2_0674_44_2
Type: CAZyme
Location: 1810 - 3507 (-)
Gene ID: HRGMv2_0674_44_3
Type: TC
Location: 3531 - 4412 (-)
Gene ID: HRGMv2_0674_44_4
Type: TC
Location: 4431 - 5333 (-)
Gene ID: HRGMv2_0674_44_5
Type:
Location: 5349 - 5627 (-)
Gene ID: HRGMv2_0674_44_6
Type: TF
Location: 5599 - 7881 (-)
Gene ID: HRGMv2_0674_44_7
Type: CAZyme
Location: 8344 - 9153 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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