dbCAN Logo

Cluster: HRGMv2_0674_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0674_34 HRGMv2_0674_34_4 6268 7341 - 4.D.2.1.5
CAZyme HRGMv2_0674_34 HRGMv2_0674_34_5 7338 8486 - GT4
NULL(UNKNOWN) HRGMv2_0674_34 HRGMv2_0674_34_6 8617 8748 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0674_34 HRGMv2_0674_34_7 9011 9643 - Pribosyltran
TC HRGMv2_0674_34 HRGMv2_0674_34_8 9729 10574 - 8.A.5.1.4
pfam HRGMv2_0674_34 HRGMv2_0674_34_9 10917 11900 + HlyD_3
TC HRGMv2_0674_34 HRGMv2_0674_34_10 11897 13054 + 3.A.1.122.2
CAZyme HRGMv2_0674_34 HRGMv2_0674_34_11 13688 14848 - GH18
pfam HRGMv2_0674_34 HRGMv2_0674_34_12 15042 15674 + PRK | AAA_18
CAZyme HRGMv2_0674_34 HRGMv2_0674_34_13 16123 17778 + GH2
CAZyme HRGMv2_0674_34 HRGMv2_0674_34_14 17792 19099 + GH29
Gene ID: HRGMv2_0674_34_4
Type: TC
Location: 6268 - 7341 (-)
Gene ID: HRGMv2_0674_34_5
Type: CAZyme
Location: 7338 - 8486 (-)
Gene ID: HRGMv2_0674_34_6
Type:
Location: 8617 - 8748 (+)
Gene ID: HRGMv2_0674_34_7
Type: STP
Location: 9011 - 9643 (-)
Gene ID: HRGMv2_0674_34_8
Type: TC
Location: 9729 - 10574 (-)
Gene ID: HRGMv2_0674_34_9
Type: pfam
Location: 10917 - 11900 (+)
Gene ID: HRGMv2_0674_34_10
Type: TC
Location: 11897 - 13054 (+)
Gene ID: HRGMv2_0674_34_11
Type: CAZyme
Location: 13688 - 14848 (-)
Gene ID: HRGMv2_0674_34_12
Type: pfam
Location: 15042 - 15674 (+)
Gene ID: HRGMv2_0674_34_13
Type: CAZyme
Location: 16123 - 17778 (+)
Gene ID: HRGMv2_0674_34_14
Type: CAZyme
Location: 17792 - 19099 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List