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Cluster: HRGMv2_0674_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0674_33 HRGMv2_0674_33_8 5570 6331 - GT111
pfam HRGMv2_0674_33 HRGMv2_0674_33_9 6363 7469 - DAO | Amino_oxidase | GLF | NAD_binding_8
TC HRGMv2_0674_33 HRGMv2_0674_33_10 7485 8273 - 3.A.1.103.5
pfam HRGMv2_0674_33 HRGMv2_0674_33_11 8288 9055 - ABC2_membrane
CAZyme HRGMv2_0674_33 HRGMv2_0674_33_12 9065 11749 - GT2
CAZyme HRGMv2_0674_33 HRGMv2_0674_33_13 11953 12963 - GT2
CAZyme HRGMv2_0674_33 HRGMv2_0674_33_14 12960 13922 - GT2
CAZyme HRGMv2_0674_33 HRGMv2_0674_33_15 13919 14920 - GT2
TC HRGMv2_0674_33 HRGMv2_0674_33_16 14945 16339 - 9.B.18.1.1
Gene ID: HRGMv2_0674_33_8
Type: CAZyme
Location: 5570 - 6331 (-)
Gene ID: HRGMv2_0674_33_9
Type: pfam
Location: 6363 - 7469 (-)
Gene ID: HRGMv2_0674_33_10
Type: TC
Location: 7485 - 8273 (-)
Gene ID: HRGMv2_0674_33_11
Type: pfam
Location: 8288 - 9055 (-)
Gene ID: HRGMv2_0674_33_12
Type: CAZyme
Location: 9065 - 11749 (-)
Gene ID: HRGMv2_0674_33_13
Type: CAZyme
Location: 11953 - 12963 (-)
Gene ID: HRGMv2_0674_33_14
Type: CAZyme
Location: 12960 - 13922 (-)
Gene ID: HRGMv2_0674_33_15
Type: CAZyme
Location: 13919 - 14920 (-)
Gene ID: HRGMv2_0674_33_16
Type: TC
Location: 14945 - 16339 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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