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Cluster: HRGMv2_0674_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0674_31 HRGMv2_0674_31_6 6508 7902 + CE1
pfam HRGMv2_0674_31 HRGMv2_0674_31_7 8093 9400 + MatE | MatE
TC HRGMv2_0674_31 HRGMv2_0674_31_8 9531 10475 + 3.A.1.1.10
TC HRGMv2_0674_31 HRGMv2_0674_31_9 10493 11437 + 3.A.1.1.29
STP HRGMv2_0674_31 HRGMv2_0674_31_10 11491 13041 + SBP_bac_1
CAZyme HRGMv2_0674_31 HRGMv2_0674_31_11 13122 15350 + GH35
Gene ID: HRGMv2_0674_31_6
Type: CAZyme
Location: 6508 - 7902 (+)
Gene ID: HRGMv2_0674_31_7
Type: pfam
Location: 8093 - 9400 (+)
Gene ID: HRGMv2_0674_31_8
Type: TC
Location: 9531 - 10475 (+)
Gene ID: HRGMv2_0674_31_9
Type: TC
Location: 10493 - 11437 (+)
Gene ID: HRGMv2_0674_31_10
Type: STP
Location: 11491 - 13041 (+)
Gene ID: HRGMv2_0674_31_11
Type: CAZyme
Location: 13122 - 15350 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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