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Cluster: HRGMv2_0674_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0674_17 HRGMv2_0674_17_15 14582 15694 + GH5_13
pfam HRGMv2_0674_17 HRGMv2_0674_17_16 15722 16822 + Aldose_epim
TC HRGMv2_0674_17 HRGMv2_0674_17_17 16848 18614 + 8.A.59.2.1
TF HRGMv2_0674_17 HRGMv2_0674_17_18 18592 20175 + HTH_AraC
TC HRGMv2_0674_17 HRGMv2_0674_17_19 20362 22062 + 3.A.1.1.9
TC HRGMv2_0674_17 HRGMv2_0674_17_20 22158 23090 + 3.A.1.1.9
TC HRGMv2_0674_17 HRGMv2_0674_17_21 23115 24029 + 3.A.1.1.9
Gene ID: HRGMv2_0674_17_15
Type: CAZyme
Location: 14582 - 15694 (+)
Gene ID: HRGMv2_0674_17_16
Type: pfam
Location: 15722 - 16822 (+)
Gene ID: HRGMv2_0674_17_17
Type: TC
Location: 16848 - 18614 (+)
Gene ID: HRGMv2_0674_17_18
Type: TF
Location: 18592 - 20175 (+)
Gene ID: HRGMv2_0674_17_19
Type: TC
Location: 20362 - 22062 (+)
Gene ID: HRGMv2_0674_17_20
Type: TC
Location: 22158 - 23090 (+)
Gene ID: HRGMv2_0674_17_21
Type: TC
Location: 23115 - 24029 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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