dbCAN Logo

Cluster: HRGMv2_0674_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0674_5 HRGMv2_0674_5_17 14801 15973 + 2.A.37.3.3
peptidase HRGMv2_0674_5 HRGMv2_0674_5_18 16100 17491 - M18.UPW
CAZyme HRGMv2_0674_5 HRGMv2_0674_5_19 17885 20107 + GH31_3
TC HRGMv2_0674_5 HRGMv2_0674_5_20 20562 23093 + 3.A.3.5.15
Gene ID: HRGMv2_0674_5_17
Type: TC
Location: 14801 - 15973 (+)
Gene ID: HRGMv2_0674_5_18
Type: peptidase
Location: 16100 - 17491 (-)
Gene ID: HRGMv2_0674_5_19
Type: CAZyme
Location: 17885 - 20107 (+)
Gene ID: HRGMv2_0674_5_20
Type: TC
Location: 20562 - 23093 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0674_5_19 vegetarian > vegan 1.17109 0.00229

🧭 Explore Read Mapping of CGC

← Back to Cluster List