Cluster: HRGMv2_0673_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- CGC Family ID: CGCFAM_01157
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0673_6 | HRGMv2_0673_6_62 | 68383 | 69117 | + | 3.A.1.105.1 |
| pfam | HRGMv2_0673_6 | HRGMv2_0673_6_63 | 69114 | 69851 | + | ABC2_membrane | ABC2_membrane_3 |
| NULL(UNKNOWN) | HRGMv2_0673_6 | HRGMv2_0673_6_64 | 69927 | 71063 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0673_6 | HRGMv2_0673_6_65 | 71216 | 72316 | + | GT2 |
Gene ID: HRGMv2_0673_6_62
Type: TC
Location: 68383 - 69117 (+)
Type: TC
Location: 68383 - 69117 (+)
Gene ID: HRGMv2_0673_6_63
Type: pfam
Location: 69114 - 69851 (+)
Type: pfam
Location: 69114 - 69851 (+)
Gene ID: HRGMv2_0673_6_64
Type:
Location: 69927 - 71063 (-)
Type:
Location: 69927 - 71063 (-)
Gene ID: HRGMv2_0673_6_65
Type: CAZyme
Location: 71216 - 72316 (+)
Type: CAZyme
Location: 71216 - 72316 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_6_62 | vegetarian > vegan | 3.64638 | 0.00136 |
| HRGMv2_0673_6_63 | vegetarian > vegan | 5.50268 | 0.00136 |
| HRGMv2_0673_6_64 | vegetarian > vegan | 4.78485 | 0.00136 |
| HRGMv2_0673_6_65 | vegetarian > vegan | 2.38685 | 0.00136 |