Cluster: HRGMv2_0673_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- CGC Family ID: CGCFAM_00366
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0673_3 | HRGMv2_0673_3_176 | 187311 | 188213 | - | 3.A.1.1.10 |
| TC | HRGMv2_0673_3 | HRGMv2_0673_3_177 | 188227 | 189150 | - | 3.A.1.1.10 |
| pfam | HRGMv2_0673_3 | HRGMv2_0673_3_178 | 189424 | 191079 | + | FGGY_N | FGGY_C |
| CAZyme | HRGMv2_0673_3 | HRGMv2_0673_3_179 | 191093 | 192061 | + | GH33 |
Gene ID: HRGMv2_0673_3_176
Type: TC
Location: 187311 - 188213 (-)
Type: TC
Location: 187311 - 188213 (-)
Gene ID: HRGMv2_0673_3_177
Type: TC
Location: 188227 - 189150 (-)
Type: TC
Location: 188227 - 189150 (-)
Gene ID: HRGMv2_0673_3_178
Type: pfam
Location: 189424 - 191079 (+)
Type: pfam
Location: 189424 - 191079 (+)
Gene ID: HRGMv2_0673_3_179
Type: CAZyme
Location: 191093 - 192061 (+)
Type: CAZyme
Location: 191093 - 192061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_3_176 | vegetarian > vegan | 4.63676 | 0.00136 |
| HRGMv2_0673_3_177 | vegetarian > vegan | 16.92681 | 0.00136 |
| HRGMv2_0673_3_178 | vegetarian > vegan | 17.04749 | 0.00136 |
| HRGMv2_0673_3_179 | vegetarian > vegan | 17.18343 | 0.00136 |