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Cluster: HRGMv2_0673_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0673_3 HRGMv2_0673_3_163 172607 174259 - GH5_46
STP HRGMv2_0673_3 HRGMv2_0673_3_164 174392 175981 - SBP_bac_1
TC HRGMv2_0673_3 HRGMv2_0673_3_165 176157 177071 - 3.A.1.1.10
TC HRGMv2_0673_3 HRGMv2_0673_3_166 177092 178030 - 3.A.1.1.10
TF HRGMv2_0673_3 HRGMv2_0673_3_167 178244 179017 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) HRGMv2_0673_3 HRGMv2_0673_3_168 179197 179685 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0673_3 HRGMv2_0673_3_169 179685 180527 - 3.A.1.15.2
TC HRGMv2_0673_3 HRGMv2_0673_3_170 180524 181237 - 3.A.1.15.3
Gene ID: HRGMv2_0673_3_163
Type: CAZyme
Location: 172607 - 174259 (-)
Gene ID: HRGMv2_0673_3_164
Type: STP
Location: 174392 - 175981 (-)
Gene ID: HRGMv2_0673_3_165
Type: TC
Location: 176157 - 177071 (-)
Gene ID: HRGMv2_0673_3_166
Type: TC
Location: 177092 - 178030 (-)
Gene ID: HRGMv2_0673_3_167
Type: TF
Location: 178244 - 179017 (+)
Gene ID: HRGMv2_0673_3_168
Type:
Location: 179197 - 179685 (-)
Gene ID: HRGMv2_0673_3_169
Type: TC
Location: 179685 - 180527 (-)
Gene ID: HRGMv2_0673_3_170
Type: TC
Location: 180524 - 181237 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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