Cluster: HRGMv2_0673_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0673
- CGC Family ID: CGCFAM_00930
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0673_3 | HRGMv2_0673_3_112 | 116503 | 117996 | + | GH77 |
| STP | HRGMv2_0673_3 | HRGMv2_0673_3_113 | 118289 | 119227 | + | Peripla_BP_1 |
| TC | HRGMv2_0673_3 | HRGMv2_0673_3_114 | 119331 | 120809 | + | 3.A.1.2.19 |
| TC | HRGMv2_0673_3 | HRGMv2_0673_3_115 | 120826 | 121860 | + | 3.A.1.2.15 |
| CAZyme | HRGMv2_0673_3 | HRGMv2_0673_3_116 | 121885 | 122940 | + | GH179 |
Gene ID: HRGMv2_0673_3_112
Type: CAZyme
Location: 116503 - 117996 (+)
Type: CAZyme
Location: 116503 - 117996 (+)
Gene ID: HRGMv2_0673_3_113
Type: STP
Location: 118289 - 119227 (+)
Type: STP
Location: 118289 - 119227 (+)
Gene ID: HRGMv2_0673_3_114
Type: TC
Location: 119331 - 120809 (+)
Type: TC
Location: 119331 - 120809 (+)
Gene ID: HRGMv2_0673_3_115
Type: TC
Location: 120826 - 121860 (+)
Type: TC
Location: 120826 - 121860 (+)
Gene ID: HRGMv2_0673_3_116
Type: CAZyme
Location: 121885 - 122940 (+)
Type: CAZyme
Location: 121885 - 122940 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_3_112 | vegetarian > vegan | 3.18226 | 0.00136 |
| HRGMv2_0673_3_116 | vegetarian > vegan | 3.56521 | 0.00136 |