Cluster: HRGMv2_0673_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0673_1 | HRGMv2_0673_1_225 | 266270 | 267346 | - | 3.A.1.1.16 |
| TC | HRGMv2_0673_1 | HRGMv2_0673_1_226 | 267383 | 269881 | - | 3.A.1.20.4 |
| STP | HRGMv2_0673_1 | HRGMv2_0673_1_227 | 269980 | 271020 | - | SBP_bac_1 |
| CAZyme | HRGMv2_0673_1 | HRGMv2_0673_1_228 | 271293 | 272036 | - | CE4 |
Gene ID: HRGMv2_0673_1_225
Type: TC
Location: 266270 - 267346 (-)
Type: TC
Location: 266270 - 267346 (-)
Gene ID: HRGMv2_0673_1_226
Type: TC
Location: 267383 - 269881 (-)
Type: TC
Location: 267383 - 269881 (-)
Gene ID: HRGMv2_0673_1_227
Type: STP
Location: 269980 - 271020 (-)
Type: STP
Location: 269980 - 271020 (-)
Gene ID: HRGMv2_0673_1_228
Type: CAZyme
Location: 271293 - 272036 (-)
Type: CAZyme
Location: 271293 - 272036 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_1_228 | vegetarian > vegan | 17.07095 | 0.00136 |