Cluster: HRGMv2_0673_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- CGC Family ID: CGCFAM_01641
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0673_1 | HRGMv2_0673_1_123 | 141776 | 142687 | - | 3.A.1.1.10 |
| TC | HRGMv2_0673_1 | HRGMv2_0673_1_124 | 142704 | 143687 | - | 3.A.1.1.10 |
| TC | HRGMv2_0673_1 | HRGMv2_0673_1_125 | 143772 | 145355 | - | 3.A.1.1.10 |
| CAZyme | HRGMv2_0673_1 | HRGMv2_0673_1_126 | 145431 | 146741 | - | GH4 |
Gene ID: HRGMv2_0673_1_123
Type: TC
Location: 141776 - 142687 (-)
Type: TC
Location: 141776 - 142687 (-)
Gene ID: HRGMv2_0673_1_124
Type: TC
Location: 142704 - 143687 (-)
Type: TC
Location: 142704 - 143687 (-)
Gene ID: HRGMv2_0673_1_125
Type: TC
Location: 143772 - 145355 (-)
Type: TC
Location: 143772 - 145355 (-)
Gene ID: HRGMv2_0673_1_126
Type: CAZyme
Location: 145431 - 146741 (-)
Type: CAZyme
Location: 145431 - 146741 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_1_123 | vegetarian > vegan | 5.25929 | 0.00136 |
| HRGMv2_0673_1_124 | vegetarian > vegan | 5.24520 | 0.00136 |
| HRGMv2_0673_1_125 | vegetarian > vegan | 3.75541 | 0.00136 |
| HRGMv2_0673_1_126 | vegetarian > vegan | 1.42459 | 0.00136 |