Cluster: HRGMv2_0673_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- CGC Family ID: CGCFAM_06021
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0673_14 | HRGMv2_0673_14_22 | 21280 | 23190 | - | 3.A.16.1.1 |
| pfam | HRGMv2_0673_14 | HRGMv2_0673_14_23 | 23394 | 25238 | + | GIY-YIG | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH |
| STP | HRGMv2_0673_14 | HRGMv2_0673_14_24 | 25484 | 27076 | - | SBP_bac_5 |
| CAZyme | HRGMv2_0673_14 | HRGMv2_0673_14_25 | 27036 | 27782 | - | GH23 |
Gene ID: HRGMv2_0673_14_22
Type: TC
Location: 21280 - 23190 (-)
Type: TC
Location: 21280 - 23190 (-)
Gene ID: HRGMv2_0673_14_23
Type: pfam
Location: 23394 - 25238 (+)
Type: pfam
Location: 23394 - 25238 (+)
Gene ID: HRGMv2_0673_14_24
Type: STP
Location: 25484 - 27076 (-)
Type: STP
Location: 25484 - 27076 (-)
Gene ID: HRGMv2_0673_14_25
Type: CAZyme
Location: 27036 - 27782 (-)
Type: CAZyme
Location: 27036 - 27782 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_14_24 | vegetarian > vegan | 4.90942 | 0.00136 |
| HRGMv2_0673_14_25 | vegetarian > vegan | 17.33975 | 0.00136 |