dbCAN HGM

Cluster: HRGMv2_0673_CGC14

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0673_11	HRGMv2_0673_11_31	36069	37727	-	GH123
STP	HRGMv2_0673_11	HRGMv2_0673_11_32	37967	39256	+	SBP_bac_1
TC	HRGMv2_0673_11	HRGMv2_0673_11_33	39683	40621	+	3.A.1.1.20
TC	HRGMv2_0673_11	HRGMv2_0673_11_34	40635	41519	+	3.A.1.1.34
TC	HRGMv2_0673_11	HRGMv2_0673_11_35	41666	42748	+	3.A.1.20.3
TC	HRGMv2_0673_11	HRGMv2_0673_11_36	43062	45149	+	3.A.1.20.2
TC	HRGMv2_0673_11	HRGMv2_0673_11_37	45156	46235	+	3.A.1.20.2

Gene ID: HRGMv2_0673_11_31
Type: CAZyme
Location: 36069 - 37727 (-)

Gene ID: HRGMv2_0673_11_32
Type: STP
Location: 37967 - 39256 (+)

Gene ID: HRGMv2_0673_11_33
Type: TC
Location: 39683 - 40621 (+)

Gene ID: HRGMv2_0673_11_34
Type: TC
Location: 40635 - 41519 (+)

Gene ID: HRGMv2_0673_11_35
Type: TC
Location: 41666 - 42748 (+)

Gene ID: HRGMv2_0673_11_36
Type: TC
Location: 43062 - 45149 (+)

Gene ID: HRGMv2_0673_11_37
Type: TC
Location: 45156 - 46235 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0673_11_31	vegetarian > vegan	3.38112	0.00136
HRGMv2_0673_11_32	vegetarian > vegan	17.12721	0.00136
HRGMv2_0673_11_33	vegetarian > vegan	1.75114	0.00136
HRGMv2_0673_11_34	vegetarian > vegan	6.36308	0.00136