Cluster: HRGMv2_0673_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0673_7 | HRGMv2_0673_7_96 | 97280 | 98689 | - | 2.A.66.1.45 |
| TC | HRGMv2_0673_7 | HRGMv2_0673_7_97 | 99093 | 100367 | + | 3.A.1.1.16 |
| TC | HRGMv2_0673_7 | HRGMv2_0673_7_98 | 100493 | 101428 | + | 3.A.1.1.46 |
| TC | HRGMv2_0673_7 | HRGMv2_0673_7_99 | 101443 | 102324 | + | 3.A.1.1.20 |
| CAZyme | HRGMv2_0673_7 | HRGMv2_0673_7_100 | 102336 | 103115 | + | CE1 |
Gene ID: HRGMv2_0673_7_96
Type: TC
Location: 97280 - 98689 (-)
Type: TC
Location: 97280 - 98689 (-)
Gene ID: HRGMv2_0673_7_97
Type: TC
Location: 99093 - 100367 (+)
Type: TC
Location: 99093 - 100367 (+)
Gene ID: HRGMv2_0673_7_98
Type: TC
Location: 100493 - 101428 (+)
Type: TC
Location: 100493 - 101428 (+)
Gene ID: HRGMv2_0673_7_99
Type: TC
Location: 101443 - 102324 (+)
Type: TC
Location: 101443 - 102324 (+)
Gene ID: HRGMv2_0673_7_100
Type: CAZyme
Location: 102336 - 103115 (+)
Type: CAZyme
Location: 102336 - 103115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_7_96 | vegetarian > vegan | 6.57743 | 0.00136 |
| HRGMv2_0673_7_97 | vegetarian > vegan | 4.09071 | 0.00136 |
| HRGMv2_0673_7_98 | vegetarian > vegan | 3.02282 | 0.00136 |
| HRGMv2_0673_7_99 | vegetarian > vegan | 17.01016 | 0.00136 |
| HRGMv2_0673_7_100 | vegetarian > vegan | 17.15119 | 0.00136 |