Cluster: HRGMv2_0673_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- CGC Family ID: CGCFAM_09743
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0673_7 | HRGMv2_0673_7_42 | 36640 | 38067 | + | GH165 |
| NULL(UNKNOWN) | HRGMv2_0673_7 | HRGMv2_0673_7_43 | 38074 | 38433 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0673_7 | HRGMv2_0673_7_44 | 38847 | 40385 | - | FGGY_N | FGGY_C |
| TC | HRGMv2_0673_7 | HRGMv2_0673_7_45 | 40739 | 42094 | + | 2.A.22.5.3 |
Gene ID: HRGMv2_0673_7_42
Type: CAZyme
Location: 36640 - 38067 (+)
Type: CAZyme
Location: 36640 - 38067 (+)
Gene ID: HRGMv2_0673_7_43
Type:
Location: 38074 - 38433 (+)
Type:
Location: 38074 - 38433 (+)
Gene ID: HRGMv2_0673_7_44
Type: pfam
Location: 38847 - 40385 (-)
Type: pfam
Location: 38847 - 40385 (-)
Gene ID: HRGMv2_0673_7_45
Type: TC
Location: 40739 - 42094 (+)
Type: TC
Location: 40739 - 42094 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_7_42 | vegetarian > vegan | 5.87661 | 0.00136 |
| HRGMv2_0673_7_43 | vegetarian > vegan | 3.45959 | 0.00136 |
| HRGMv2_0673_7_45 | vegetarian > vegan | 1.32729 | 0.00136 |