Cluster: HRGMv2_0673_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- CGC Family ID: CGCFAM_01341
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0673_6 | HRGMv2_0673_6_100 | 116144 | 117073 | - | 3.A.1.1.20 |
| TC | HRGMv2_0673_6 | HRGMv2_0673_6_101 | 117081 | 118208 | - | 3.A.1.1.7 |
| TC | HRGMv2_0673_6 | HRGMv2_0673_6_102 | 118174 | 119280 | - | 3.A.1.1.22 |
| pfam | HRGMv2_0673_6 | HRGMv2_0673_6_103 | 119288 | 120025 | - | YdjC |
| CAZyme | HRGMv2_0673_6 | HRGMv2_0673_6_104 | 120022 | 121344 | - | GH4 |
Gene ID: HRGMv2_0673_6_100
Type: TC
Location: 116144 - 117073 (-)
Type: TC
Location: 116144 - 117073 (-)
Gene ID: HRGMv2_0673_6_101
Type: TC
Location: 117081 - 118208 (-)
Type: TC
Location: 117081 - 118208 (-)
Gene ID: HRGMv2_0673_6_102
Type: TC
Location: 118174 - 119280 (-)
Type: TC
Location: 118174 - 119280 (-)
Gene ID: HRGMv2_0673_6_103
Type: pfam
Location: 119288 - 120025 (-)
Type: pfam
Location: 119288 - 120025 (-)
Gene ID: HRGMv2_0673_6_104
Type: CAZyme
Location: 120022 - 121344 (-)
Type: CAZyme
Location: 120022 - 121344 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_6_100 | vegetarian > vegan | 2.00689 | 0.00136 |
| HRGMv2_0673_6_101 | vegetarian > vegan | 1.67348 | 0.00136 |
| HRGMv2_0673_6_102 | vegetarian > vegan | 1.30265 | 0.00136 |
| HRGMv2_0673_6_103 | vegetarian > vegan | 3.17174 | 0.00136 |
| HRGMv2_0673_6_104 | vegetarian > vegan | 1.54493 | 0.00136 |