Cluster: HRGMv2_0673_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0673
- CGC Family ID: CGCFAM_00890
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0673_1 | HRGMv2_0673_1_92 | 106751 | 108133 | + | 2.A.66.1.28 |
| pfam | HRGMv2_0673_1 | HRGMv2_0673_1_93 | 108214 | 109212 | + | NYN | OST-HTH | OST-HTH |
| CAZyme | HRGMv2_0673_1 | HRGMv2_0673_1_94 | 109228 | 110175 | + | GT2 |
Gene ID: HRGMv2_0673_1_92
Type: TC
Location: 106751 - 108133 (+)
Type: TC
Location: 106751 - 108133 (+)
Gene ID: HRGMv2_0673_1_93
Type: pfam
Location: 108214 - 109212 (+)
Type: pfam
Location: 108214 - 109212 (+)
Gene ID: HRGMv2_0673_1_94
Type: CAZyme
Location: 109228 - 110175 (+)
Type: CAZyme
Location: 109228 - 110175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
SFMI01
Species
SFMI01 sp004556155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0673_1_92 | vegetarian > vegan | 2.70273 | 0.00136 |
| HRGMv2_0673_1_94 | vegetarian > vegan | 4.15905 | 0.00136 |