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Cluster: HRGMv2_0668_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0668_5 HRGMv2_0668_5_82 92008 93339 - 2.A.40.1.4
STP HRGMv2_0668_5 HRGMv2_0668_5_83 93590 94513 + PfkB
pfam HRGMv2_0668_5 HRGMv2_0668_5_84 94510 95436 + Indigoidine_A
CAZyme HRGMv2_0668_5 HRGMv2_0668_5_85 96073 97842 + GH13_20
TC HRGMv2_0668_5 HRGMv2_0668_5_86 97839 98681 + 1.A.23.4.1
NULL(UNKNOWN) HRGMv2_0668_5 HRGMv2_0668_5_87 99023 99184 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0668_5 HRGMv2_0668_5_88 99491 100675 - GT1
sulfatase HRGMv2_0668_5 HRGMv2_0668_5_89 100792 102636 - S1_97
sulfatase HRGMv2_0668_5 HRGMv2_0668_5_90 103002 104612 - S1_97
TC HRGMv2_0668_5 HRGMv2_0668_5_91 105508 106881 - 2.A.66.1.33
Gene ID: HRGMv2_0668_5_82
Type: TC
Location: 92008 - 93339 (-)
Gene ID: HRGMv2_0668_5_83
Type: STP
Location: 93590 - 94513 (+)
Gene ID: HRGMv2_0668_5_84
Type: pfam
Location: 94510 - 95436 (+)
Gene ID: HRGMv2_0668_5_85
Type: CAZyme
Location: 96073 - 97842 (+)
Gene ID: HRGMv2_0668_5_86
Type: TC
Location: 97839 - 98681 (+)
Gene ID: HRGMv2_0668_5_87
Type:
Location: 99023 - 99184 (-)
Gene ID: HRGMv2_0668_5_88
Type: CAZyme
Location: 99491 - 100675 (-)
Gene ID: HRGMv2_0668_5_89
Type: sulfatase
Location: 100792 - 102636 (-)
Gene ID: HRGMv2_0668_5_90
Type: sulfatase
Location: 103002 - 104612 (-)
Gene ID: HRGMv2_0668_5_91
Type: TC
Location: 105508 - 106881 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0668_5_86 vegan > omnivore 1.39119 0.01579
HRGMv2_0668_5_87 vegan > omnivore 1.92197 0.01579

🧭 Explore Read Mapping of CGC

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