dbCAN HGM

Cluster: HRGMv2_0668_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0668_2	HRGMv2_0668_2_68	76533	77540	+	GT2
TC	HRGMv2_0668_2	HRGMv2_0668_2_69	77577	79103	+	2.A.66.1.40
CAZyme	HRGMv2_0668_2	HRGMv2_0668_2_70	79096	80157	+	GT2
TC	HRGMv2_0668_2	HRGMv2_0668_2_71	80459	82159	+	3.A.1.5.25
TC	HRGMv2_0668_2	HRGMv2_0668_2_72	82330	83286	+	3.A.1.5.19
TC	HRGMv2_0668_2	HRGMv2_0668_2_73	83279	84409	+	3.A.1.5.19
peptidase	HRGMv2_0668_2	HRGMv2_0668_2_74	84444	86240	+	S09.UPA
TC	HRGMv2_0668_2	HRGMv2_0668_2_75	86260	87321	+	3.A.1.5.19
TC	HRGMv2_0668_2	HRGMv2_0668_2_76	87318	88253	+	3.A.1.5.19

Gene ID: HRGMv2_0668_2_68
Type: CAZyme
Location: 76533 - 77540 (+)

Gene ID: HRGMv2_0668_2_69
Type: TC
Location: 77577 - 79103 (+)

Gene ID: HRGMv2_0668_2_70
Type: CAZyme
Location: 79096 - 80157 (+)

Gene ID: HRGMv2_0668_2_71
Type: TC
Location: 80459 - 82159 (+)

Gene ID: HRGMv2_0668_2_72
Type: TC
Location: 82330 - 83286 (+)

Gene ID: HRGMv2_0668_2_73
Type: TC
Location: 83279 - 84409 (+)

Gene ID: HRGMv2_0668_2_74
Type: peptidase
Location: 84444 - 86240 (+)

Gene ID: HRGMv2_0668_2_75
Type: TC
Location: 86260 - 87321 (+)

Gene ID: HRGMv2_0668_2_76
Type: TC
Location: 87318 - 88253 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0668_2_70	vegan > omnivore	1.60584	0.01579
HRGMv2_0668_2_71	vegan > omnivore	1.74419	0.01579
HRGMv2_0668_2_72	vegan > omnivore	1.06536	0.01579
HRGMv2_0668_2_73	vegan > omnivore	1.48643	0.01579
HRGMv2_0668_2_74	vegan > omnivore	1.24958	0.01579