Cluster: HRGMv2_0668_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0668
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0668_17 | HRGMv2_0668_17_29 | 38455 | 39975 | + | GH3 |
| TC | HRGMv2_0668_17 | HRGMv2_0668_17_30 | 40089 | 41345 | + | 3.A.1.1.21 |
| TC | HRGMv2_0668_17 | HRGMv2_0668_17_31 | 41616 | 42533 | + | 3.A.1.1.11 |
| TC | HRGMv2_0668_17 | HRGMv2_0668_17_32 | 42530 | 43351 | + | 3.A.1.1.48 |
Gene ID: HRGMv2_0668_17_29
Type: CAZyme
Location: 38455 - 39975 (+)
Type: CAZyme
Location: 38455 - 39975 (+)
Gene ID: HRGMv2_0668_17_30
Type: TC
Location: 40089 - 41345 (+)
Type: TC
Location: 40089 - 41345 (+)
Gene ID: HRGMv2_0668_17_31
Type: TC
Location: 41616 - 42533 (+)
Type: TC
Location: 41616 - 42533 (+)
Gene ID: HRGMv2_0668_17_32
Type: TC
Location: 42530 - 43351 (+)
Type: TC
Location: 42530 - 43351 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola sp900548125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0668_17_29 | vegan > omnivore | 1.48323 | 0.01579 |
| HRGMv2_0668_17_30 | vegan > omnivore | 1.34805 | 0.01579 |
| HRGMv2_0668_17_31 | vegan > omnivore | 1.26454 | 0.01579 |
| HRGMv2_0668_17_32 | vegan > omnivore | 1.28980 | 0.01579 |