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Cluster: HRGMv2_0668_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0668_15 HRGMv2_0668_15_21 24815 26743 - GH2
pfam HRGMv2_0668_15 HRGMv2_0668_15_22 27030 28211 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC HRGMv2_0668_15 HRGMv2_0668_15_23 28759 29988 + 9.B.10.1.1
pfam HRGMv2_0668_15 HRGMv2_0668_15_24 30002 30946 + cobW | DUF1980_C
TC HRGMv2_0668_15 HRGMv2_0668_15_25 31200 32051 + 3.A.1.26.7
TC HRGMv2_0668_15 HRGMv2_0668_15_26 32027 32893 + 3.A.1.26.9
TC HRGMv2_0668_15 HRGMv2_0668_15_27 32886 33692 + 3.A.1.25.4
pfam HRGMv2_0668_15 HRGMv2_0668_15_28 33685 34518 + PseudoU_synth_1 | PseudoU_synth_1
pfam HRGMv2_0668_15 HRGMv2_0668_15_29 35049 35363 + SpoIIID
TC HRGMv2_0668_15 HRGMv2_0668_15_30 35418 36455 + 1.A.33.1.5
Gene ID: HRGMv2_0668_15_21
Type: CAZyme
Location: 24815 - 26743 (-)
Gene ID: HRGMv2_0668_15_22
Type: pfam
Location: 27030 - 28211 (-)
Gene ID: HRGMv2_0668_15_23
Type: TC
Location: 28759 - 29988 (+)
Gene ID: HRGMv2_0668_15_24
Type: pfam
Location: 30002 - 30946 (+)
Gene ID: HRGMv2_0668_15_25
Type: TC
Location: 31200 - 32051 (+)
Gene ID: HRGMv2_0668_15_26
Type: TC
Location: 32027 - 32893 (+)
Gene ID: HRGMv2_0668_15_27
Type: TC
Location: 32886 - 33692 (+)
Gene ID: HRGMv2_0668_15_28
Type: pfam
Location: 33685 - 34518 (+)
Gene ID: HRGMv2_0668_15_29
Type: pfam
Location: 35049 - 35363 (+)
Gene ID: HRGMv2_0668_15_30
Type: TC
Location: 35418 - 36455 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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