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Cluster: HRGMv2_0668_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0668_9 HRGMv2_0668_9_42 44494 45864 - 2.A.66.1.33
STP HRGMv2_0668_9 HRGMv2_0668_9_43 45909 47093 - Fer4
pfam HRGMv2_0668_9 HRGMv2_0668_9_44 47090 48262 - PS_pyruv_trans
CAZyme HRGMv2_0668_9 HRGMv2_0668_9_45 48259 49242 - GT2
CAZyme HRGMv2_0668_9 HRGMv2_0668_9_46 49258 50178 - GT2
CAZyme HRGMv2_0668_9 HRGMv2_0668_9_47 50175 51197 - GT2
CAZyme HRGMv2_0668_9 HRGMv2_0668_9_48 51194 52237 - GT2
Gene ID: HRGMv2_0668_9_42
Type: TC
Location: 44494 - 45864 (-)
Gene ID: HRGMv2_0668_9_43
Type: STP
Location: 45909 - 47093 (-)
Gene ID: HRGMv2_0668_9_44
Type: pfam
Location: 47090 - 48262 (-)
Gene ID: HRGMv2_0668_9_45
Type: CAZyme
Location: 48259 - 49242 (-)
Gene ID: HRGMv2_0668_9_46
Type: CAZyme
Location: 49258 - 50178 (-)
Gene ID: HRGMv2_0668_9_47
Type: CAZyme
Location: 50175 - 51197 (-)
Gene ID: HRGMv2_0668_9_48
Type: CAZyme
Location: 51194 - 52237 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0668_9_43 vegan > omnivore 1.35206 0.01579
HRGMv2_0668_9_44 vegan > omnivore 1.16265 0.01579
HRGMv2_0668_9_46 vegan > omnivore 1.35420 0.01579

🧭 Explore Read Mapping of CGC

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