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Cluster: HRGMv2_0668_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0668_8 HRGMv2_0668_8_74 83595 84317 + CE4
NULL(UNKNOWN) HRGMv2_0668_8 HRGMv2_0668_8_75 84330 84566 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0668_8 HRGMv2_0668_8_76 84633 85082 + LacAB_rpiB
CAZyme HRGMv2_0668_8 HRGMv2_0668_8_77 85331 86569 + GH28
CAZyme HRGMv2_0668_8 HRGMv2_0668_8_78 86583 87662 + GH105
TC HRGMv2_0668_8 HRGMv2_0668_8_79 87933 89198 + 3.A.1.1.11
TC HRGMv2_0668_8 HRGMv2_0668_8_80 89337 90284 + 3.A.1.1.11
TC HRGMv2_0668_8 HRGMv2_0668_8_81 90288 91334 + 3.A.1.1.11
Gene ID: HRGMv2_0668_8_74
Type: CAZyme
Location: 83595 - 84317 (+)
Gene ID: HRGMv2_0668_8_75
Type:
Location: 84330 - 84566 (+)
Gene ID: HRGMv2_0668_8_76
Type: pfam
Location: 84633 - 85082 (+)
Gene ID: HRGMv2_0668_8_77
Type: CAZyme
Location: 85331 - 86569 (+)
Gene ID: HRGMv2_0668_8_78
Type: CAZyme
Location: 86583 - 87662 (+)
Gene ID: HRGMv2_0668_8_79
Type: TC
Location: 87933 - 89198 (+)
Gene ID: HRGMv2_0668_8_80
Type: TC
Location: 89337 - 90284 (+)
Gene ID: HRGMv2_0668_8_81
Type: TC
Location: 90288 - 91334 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0668_8_74 vegan > omnivore 1.20250 0.01579

🧭 Explore Read Mapping of CGC

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