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Cluster: HRGMv2_0667_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0667_26 HRGMv2_0667_26_9 10868 11914 - 3.A.1.1.11
TC HRGMv2_0667_26 HRGMv2_0667_26_10 11918 12859 - 3.A.1.1.11
TC HRGMv2_0667_26 HRGMv2_0667_26_11 12944 14209 - 3.A.1.1.11
CAZyme HRGMv2_0667_26 HRGMv2_0667_26_12 14457 15536 - GH105
CAZyme HRGMv2_0667_26 HRGMv2_0667_26_13 15549 16787 - GH28
pfam HRGMv2_0667_26 HRGMv2_0667_26_14 16787 17236 - LacAB_rpiB
NULL(UNKNOWN) HRGMv2_0667_26 HRGMv2_0667_26_15 17272 17511 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0667_26 HRGMv2_0667_26_16 17514 18245 - CE4
Gene ID: HRGMv2_0667_26_9
Type: TC
Location: 10868 - 11914 (-)
Gene ID: HRGMv2_0667_26_10
Type: TC
Location: 11918 - 12859 (-)
Gene ID: HRGMv2_0667_26_11
Type: TC
Location: 12944 - 14209 (-)
Gene ID: HRGMv2_0667_26_12
Type: CAZyme
Location: 14457 - 15536 (-)
Gene ID: HRGMv2_0667_26_13
Type: CAZyme
Location: 15549 - 16787 (-)
Gene ID: HRGMv2_0667_26_14
Type: pfam
Location: 16787 - 17236 (-)
Gene ID: HRGMv2_0667_26_15
Type:
Location: 17272 - 17511 (-)
Gene ID: HRGMv2_0667_26_16
Type: CAZyme
Location: 17514 - 18245 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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