Cluster: HRGMv2_0667_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0667
- CGC Family ID: CGCFAM_00364
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0667_14 | HRGMv2_0667_14_23 | 30142 | 32031 | + | GH20 |
| NULL(UNKNOWN) | HRGMv2_0667_14 | HRGMv2_0667_14_24 | 32049 | 32606 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_0667_14 | HRGMv2_0667_14_25 | 32593 | 33567 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_0667_14 | HRGMv2_0667_14_26 | 33759 | 35012 | + | 3.A.1.1.4 |
| TC | HRGMv2_0667_14 | HRGMv2_0667_14_27 | 35109 | 36023 | + | 3.A.1.1.4 |
| TC | HRGMv2_0667_14 | HRGMv2_0667_14_28 | 36020 | 36844 | + | 3.A.1.1.4 |
| CAZyme | HRGMv2_0667_14 | HRGMv2_0667_14_29 | 36932 | 39979 | + | GH2 |
Gene ID: HRGMv2_0667_14_23
Type: CAZyme
Location: 30142 - 32031 (+)
Type: CAZyme
Location: 30142 - 32031 (+)
Gene ID: HRGMv2_0667_14_24
Type:
Location: 32049 - 32606 (+)
Type:
Location: 32049 - 32606 (+)
Gene ID: HRGMv2_0667_14_25
Type: TF
Location: 32593 - 33567 (+)
Type: TF
Location: 32593 - 33567 (+)
Gene ID: HRGMv2_0667_14_26
Type: TC
Location: 33759 - 35012 (+)
Type: TC
Location: 33759 - 35012 (+)
Gene ID: HRGMv2_0667_14_27
Type: TC
Location: 35109 - 36023 (+)
Type: TC
Location: 35109 - 36023 (+)
Gene ID: HRGMv2_0667_14_28
Type: TC
Location: 36020 - 36844 (+)
Type: TC
Location: 36020 - 36844 (+)
Gene ID: HRGMv2_0667_14_29
Type: CAZyme
Location: 36932 - 39979 (+)
Type: CAZyme
Location: 36932 - 39979 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola sp900542395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.