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Cluster: HRGMv2_0667_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0667_12 HRGMv2_0667_12_29 23379 25712 - 3.A.11.1.1
TC HRGMv2_0667_12 HRGMv2_0667_12_30 25839 27215 - 2.A.66.1.33
STP HRGMv2_0667_12 HRGMv2_0667_12_31 27326 28516 - Fer4
pfam HRGMv2_0667_12 HRGMv2_0667_12_32 28519 29685 - PS_pyruv_trans
CAZyme HRGMv2_0667_12 HRGMv2_0667_12_33 29682 30665 - GT2
CAZyme HRGMv2_0667_12 HRGMv2_0667_12_34 30681 31601 - GT2
CAZyme HRGMv2_0667_12 HRGMv2_0667_12_35 31598 32620 - GT2
CAZyme HRGMv2_0667_12 HRGMv2_0667_12_36 32617 33660 - GT2
Gene ID: HRGMv2_0667_12_29
Type: TC
Location: 23379 - 25712 (-)
Gene ID: HRGMv2_0667_12_30
Type: TC
Location: 25839 - 27215 (-)
Gene ID: HRGMv2_0667_12_31
Type: STP
Location: 27326 - 28516 (-)
Gene ID: HRGMv2_0667_12_32
Type: pfam
Location: 28519 - 29685 (-)
Gene ID: HRGMv2_0667_12_33
Type: CAZyme
Location: 29682 - 30665 (-)
Gene ID: HRGMv2_0667_12_34
Type: CAZyme
Location: 30681 - 31601 (-)
Gene ID: HRGMv2_0667_12_35
Type: CAZyme
Location: 31598 - 32620 (-)
Gene ID: HRGMv2_0667_12_36
Type: CAZyme
Location: 32617 - 33660 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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