Cluster: HRGMv2_0667_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0667
- CGC Family ID: CGCFAM_01651
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0667_3 | HRGMv2_0667_3_49 | 55234 | 56361 | - | GH88 |
| CAZyme | HRGMv2_0667_3 | HRGMv2_0667_3_50 | 56345 | 58165 | - | GH154 |
| CAZyme | HRGMv2_0667_3 | HRGMv2_0667_3_51 | 58265 | 60118 | - | PL33_1 |
| TC | HRGMv2_0667_3 | HRGMv2_0667_3_52 | 60120 | 60989 | - | 3.A.1.1.39 |
| TC | HRGMv2_0667_3 | HRGMv2_0667_3_53 | 61004 | 61942 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_0667_3_49
Type: CAZyme
Location: 55234 - 56361 (-)
Type: CAZyme
Location: 55234 - 56361 (-)
Gene ID: HRGMv2_0667_3_50
Type: CAZyme
Location: 56345 - 58165 (-)
Type: CAZyme
Location: 56345 - 58165 (-)
Gene ID: HRGMv2_0667_3_51
Type: CAZyme
Location: 58265 - 60118 (-)
Type: CAZyme
Location: 58265 - 60118 (-)
Gene ID: HRGMv2_0667_3_52
Type: TC
Location: 60120 - 60989 (-)
Type: TC
Location: 60120 - 60989 (-)
Gene ID: HRGMv2_0667_3_53
Type: TC
Location: 61004 - 61942 (-)
Type: TC
Location: 61004 - 61942 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola sp900542395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0667_3_49 | vegan > omnivore | 2.08305 | 0.02993 |
| HRGMv2_0667_3_50 | vegan > omnivore | 2.22061 | 0.02993 |
| HRGMv2_0667_3_52 | vegetarian > omnivore | 1.25249 | 0.04510 |