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Cluster: HRGMv2_0667_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0667_1 HRGMv2_0667_1_141 159840 160403 + 2.A.88.2.1
pfam HRGMv2_0667_1 HRGMv2_0667_1_142 160563 161090 - CobA_CobO_BtuR
CAZyme HRGMv2_0667_1 HRGMv2_0667_1_143 161087 162067 - GT2
CAZyme HRGMv2_0667_1 HRGMv2_0667_1_144 162176 163108 + GT2
CAZyme HRGMv2_0667_1 HRGMv2_0667_1_145 163128 164117 + GT2
pfam HRGMv2_0667_1 HRGMv2_0667_1_146 164110 164706 + DUF218
NULL(UNKNOWN) HRGMv2_0667_1 HRGMv2_0667_1_147 165299 165460 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0667_1 HRGMv2_0667_1_148 165593 166201 - 1.E.19.1.16
Gene ID: HRGMv2_0667_1_141
Type: TC
Location: 159840 - 160403 (+)
Gene ID: HRGMv2_0667_1_142
Type: pfam
Location: 160563 - 161090 (-)
Gene ID: HRGMv2_0667_1_143
Type: CAZyme
Location: 161087 - 162067 (-)
Gene ID: HRGMv2_0667_1_144
Type: CAZyme
Location: 162176 - 163108 (+)
Gene ID: HRGMv2_0667_1_145
Type: CAZyme
Location: 163128 - 164117 (+)
Gene ID: HRGMv2_0667_1_146
Type: pfam
Location: 164110 - 164706 (+)
Gene ID: HRGMv2_0667_1_147
Type:
Location: 165299 - 165460 (-)
Gene ID: HRGMv2_0667_1_148
Type: TC
Location: 165593 - 166201 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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