Cluster: HRGMv2_0665_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0665
- CGC Family ID: CGCFAM_00076
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0665_1 | HRGMv2_0665_1_877 | 1004152 | 1005957 | - | 9.B.18.2.1 |
| pfam | HRGMv2_0665_1 | HRGMv2_0665_1_878 | 1005957 | 1007054 | - | DegT_DnrJ_EryC1 |
| pfam | HRGMv2_0665_1 | HRGMv2_0665_1_879 | 1007171 | 1007770 | - | Hexapep | PglD_N |
| TC | HRGMv2_0665_1 | HRGMv2_0665_1_880 | 1007757 | 1008362 | - | 9.B.18.1.2 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_881 | 1008355 | 1009482 | - | GT4 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_882 | 1009556 | 1012336 | - | GT66 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_883 | 1012339 | 1013457 | - | GT4 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_884 | 1013705 | 1014748 | - | GT4 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_885 | 1014745 | 1016010 | - | GT2 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_886 | 1016010 | 1017089 | - | GT4 |
Gene ID: HRGMv2_0665_1_877
Type: TC
Location: 1004152 - 1005957 (-)
Type: TC
Location: 1004152 - 1005957 (-)
Gene ID: HRGMv2_0665_1_878
Type: pfam
Location: 1005957 - 1007054 (-)
Type: pfam
Location: 1005957 - 1007054 (-)
Gene ID: HRGMv2_0665_1_879
Type: pfam
Location: 1007171 - 1007770 (-)
Type: pfam
Location: 1007171 - 1007770 (-)
Gene ID: HRGMv2_0665_1_880
Type: TC
Location: 1007757 - 1008362 (-)
Type: TC
Location: 1007757 - 1008362 (-)
Gene ID: HRGMv2_0665_1_881
Type: CAZyme
Location: 1008355 - 1009482 (-)
Type: CAZyme
Location: 1008355 - 1009482 (-)
Gene ID: HRGMv2_0665_1_882
Type: CAZyme
Location: 1009556 - 1012336 (-)
Type: CAZyme
Location: 1009556 - 1012336 (-)
Gene ID: HRGMv2_0665_1_883
Type: CAZyme
Location: 1012339 - 1013457 (-)
Type: CAZyme
Location: 1012339 - 1013457 (-)
Gene ID: HRGMv2_0665_1_884
Type: CAZyme
Location: 1013705 - 1014748 (-)
Type: CAZyme
Location: 1013705 - 1014748 (-)
Gene ID: HRGMv2_0665_1_885
Type: CAZyme
Location: 1014745 - 1016010 (-)
Type: CAZyme
Location: 1014745 - 1016010 (-)
Gene ID: HRGMv2_0665_1_886
Type: CAZyme
Location: 1016010 - 1017089 (-)
Type: CAZyme
Location: 1016010 - 1017089 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B sp019423325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.