Cluster: HRGMv2_0665_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0665
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_291 | 327854 | 329236 | - | AA4 |
| pfam | HRGMv2_0665_1 | HRGMv2_0665_1_292 | 329229 | 329957 | - | PGBA_N |
| STP | HRGMv2_0665_1 | HRGMv2_0665_1_293 | 330096 | 331265 | + | Peptidase_M23 |
| TC | HRGMv2_0665_1 | HRGMv2_0665_1_294 | 331274 | 332653 | + | 1.A.26.1.2 |
| STP | HRGMv2_0665_1 | HRGMv2_0665_1_295 | 332638 | 333225 | + | NUDIX |
| peptidase | HRGMv2_0665_1 | HRGMv2_0665_1_296 | 333293 | 334339 | + | S09.UPC |
| TC | HRGMv2_0665_1 | HRGMv2_0665_1_297 | 334923 | 335540 | + | 1.A.62.3.1 |
Gene ID: HRGMv2_0665_1_291
Type: CAZyme
Location: 327854 - 329236 (-)
Type: CAZyme
Location: 327854 - 329236 (-)
Gene ID: HRGMv2_0665_1_292
Type: pfam
Location: 329229 - 329957 (-)
Type: pfam
Location: 329229 - 329957 (-)
Gene ID: HRGMv2_0665_1_293
Type: STP
Location: 330096 - 331265 (+)
Type: STP
Location: 330096 - 331265 (+)
Gene ID: HRGMv2_0665_1_294
Type: TC
Location: 331274 - 332653 (+)
Type: TC
Location: 331274 - 332653 (+)
Gene ID: HRGMv2_0665_1_295
Type: STP
Location: 332638 - 333225 (+)
Type: STP
Location: 332638 - 333225 (+)
Gene ID: HRGMv2_0665_1_296
Type: peptidase
Location: 333293 - 334339 (+)
Type: peptidase
Location: 333293 - 334339 (+)
Gene ID: HRGMv2_0665_1_297
Type: TC
Location: 334923 - 335540 (+)
Type: TC
Location: 334923 - 335540 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B sp019423325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.