Cluster: HRGMv2_0665_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0665
- CGC Family ID: CGCFAM_00562
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_168 | 178855 | 180939 | + | PL12_3 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_169 | 180932 | 182074 | + | GT4 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_170 | 182098 | 183165 | + | GT4 |
| CAZyme | HRGMv2_0665_1 | HRGMv2_0665_1_171 | 183478 | 184584 | + | GT4 |
| pfam | HRGMv2_0665_1 | HRGMv2_0665_1_172 | 184577 | 185941 | + | NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix |
| TC | HRGMv2_0665_1 | HRGMv2_0665_1_173 | 185943 | 187253 | + | 9.B.18.1.2 |
Gene ID: HRGMv2_0665_1_168
Type: CAZyme
Location: 178855 - 180939 (+)
Type: CAZyme
Location: 178855 - 180939 (+)
Gene ID: HRGMv2_0665_1_169
Type: CAZyme
Location: 180932 - 182074 (+)
Type: CAZyme
Location: 180932 - 182074 (+)
Gene ID: HRGMv2_0665_1_170
Type: CAZyme
Location: 182098 - 183165 (+)
Type: CAZyme
Location: 182098 - 183165 (+)
Gene ID: HRGMv2_0665_1_171
Type: CAZyme
Location: 183478 - 184584 (+)
Type: CAZyme
Location: 183478 - 184584 (+)
Gene ID: HRGMv2_0665_1_172
Type: pfam
Location: 184577 - 185941 (+)
Type: pfam
Location: 184577 - 185941 (+)
Gene ID: HRGMv2_0665_1_173
Type: TC
Location: 185943 - 187253 (+)
Type: TC
Location: 185943 - 187253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_B
Species
Campylobacter_B sp019423325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.