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Cluster: HRGMv2_0653_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0653_86 HRGMv2_0653_86_12 10293 11513 - 9.B.1.1.4
peptidase HRGMv2_0653_86 HRGMv2_0653_86_13 11644 13266 + C26.964
pfam HRGMv2_0653_86 HRGMv2_0653_86_14 13287 14879 + DHH | DHHA1 | RecJ_OB
TC HRGMv2_0653_86 HRGMv2_0653_86_15 14999 15826 - 3.A.1.3.3
pfam HRGMv2_0653_86 HRGMv2_0653_86_16 15999 16943 - Carboxyl_trans | ACCA
pfam HRGMv2_0653_86 HRGMv2_0653_86_17 16952 18187 - ketoacyl-synt | Ketoacyl-synt_C
TC HRGMv2_0653_86 HRGMv2_0653_86_18 18312 18542 - 3.D.1.6.4
sulfatase HRGMv2_0653_86 HRGMv2_0653_86_19 18609 19352 - S1_2
CAZyme HRGMv2_0653_86 HRGMv2_0653_86_20 19410 21716 - GT51
Gene ID: HRGMv2_0653_86_12
Type: TC
Location: 10293 - 11513 (-)
Gene ID: HRGMv2_0653_86_13
Type: peptidase
Location: 11644 - 13266 (+)
Gene ID: HRGMv2_0653_86_14
Type: pfam
Location: 13287 - 14879 (+)
Gene ID: HRGMv2_0653_86_15
Type: TC
Location: 14999 - 15826 (-)
Gene ID: HRGMv2_0653_86_16
Type: pfam
Location: 15999 - 16943 (-)
Gene ID: HRGMv2_0653_86_17
Type: pfam
Location: 16952 - 18187 (-)
Gene ID: HRGMv2_0653_86_18
Type: TC
Location: 18312 - 18542 (-)
Gene ID: HRGMv2_0653_86_19
Type: sulfatase
Location: 18609 - 19352 (-)
Gene ID: HRGMv2_0653_86_20
Type: CAZyme
Location: 19410 - 21716 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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