Cluster: HRGMv2_0653_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0653
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0653_65 | HRGMv2_0653_65_18 | 17720 | 18610 | - | CE11 |
| pfam | HRGMv2_0653_65 | HRGMv2_0653_65_19 | 18607 | 19197 | - | MinC_C |
| STP | HRGMv2_0653_65 | HRGMv2_0653_65_20 | 19227 | 20603 | - | Peptidase_M23 |
| TC | HRGMv2_0653_65 | HRGMv2_0653_65_21 | 20774 | 21907 | - | 3.A.6.2.1 |
Gene ID: HRGMv2_0653_65_18
Type: CAZyme
Location: 17720 - 18610 (-)
Type: CAZyme
Location: 17720 - 18610 (-)
Gene ID: HRGMv2_0653_65_19
Type: pfam
Location: 18607 - 19197 (-)
Type: pfam
Location: 18607 - 19197 (-)
Gene ID: HRGMv2_0653_65_20
Type: STP
Location: 19227 - 20603 (-)
Type: STP
Location: 19227 - 20603 (-)
Gene ID: HRGMv2_0653_65_21
Type: TC
Location: 20774 - 21907 (-)
Type: TC
Location: 20774 - 21907 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_C
Species
Helicobacter_C cinaedi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.