Cluster: HRGMv2_0653_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0653
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0653_16 | HRGMv2_0653_16_25 | 22719 | 23819 | - | 3.A.1.132.3 |
| TC | HRGMv2_0653_16 | HRGMv2_0653_16_26 | 24012 | 24917 | + | 2.A.69.4.3 |
| TC | HRGMv2_0653_16 | HRGMv2_0653_16_27 | 25002 | 26795 | + | 2.A.58.2.4 |
| CAZyme | HRGMv2_0653_16 | HRGMv2_0653_16_28 | 26799 | 27602 | + | CE4 |
Gene ID: HRGMv2_0653_16_25
Type: TC
Location: 22719 - 23819 (-)
Type: TC
Location: 22719 - 23819 (-)
Gene ID: HRGMv2_0653_16_26
Type: TC
Location: 24012 - 24917 (+)
Type: TC
Location: 24012 - 24917 (+)
Gene ID: HRGMv2_0653_16_27
Type: TC
Location: 25002 - 26795 (+)
Type: TC
Location: 25002 - 26795 (+)
Gene ID: HRGMv2_0653_16_28
Type: CAZyme
Location: 26799 - 27602 (+)
Type: CAZyme
Location: 26799 - 27602 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_C
Species
Helicobacter_C cinaedi
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.