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Cluster: HRGMv2_0629_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0629_6 HRGMv2_0629_6_43 40327 41088 + 2.A.102.3.1
pfam HRGMv2_0629_6 HRGMv2_0629_6_44 41135 41719 - SRP54 | CbiA | MobB
pfam HRGMv2_0629_6 HRGMv2_0629_6_45 41871 43298 + Gln-synt_C | Gln-synt_N
TC HRGMv2_0629_6 HRGMv2_0629_6_46 43426 43656 + 3.D.1.6.4
pfam HRGMv2_0629_6 HRGMv2_0629_6_47 43777 45081 + ketoacyl-synt | Ketoacyl-synt_C
pfam HRGMv2_0629_6 HRGMv2_0629_6_48 45157 46104 + Carboxyl_trans | ACCA
TC HRGMv2_0629_6 HRGMv2_0629_6_49 46300 47556 + 3.A.11.3.1
CAZyme HRGMv2_0629_6 HRGMv2_0629_6_50 47553 48545 - GT2
STP HRGMv2_0629_6 HRGMv2_0629_6_51 48526 49305 - AAA
peptidase HRGMv2_0629_6 HRGMv2_0629_6_52 49317 50585 - U32.002
TC HRGMv2_0629_6 HRGMv2_0629_6_53 50647 51939 - 2.A.8.1.12
Gene ID: HRGMv2_0629_6_43
Type: TC
Location: 40327 - 41088 (+)
Gene ID: HRGMv2_0629_6_44
Type: pfam
Location: 41135 - 41719 (-)
Gene ID: HRGMv2_0629_6_45
Type: pfam
Location: 41871 - 43298 (+)
Gene ID: HRGMv2_0629_6_46
Type: TC
Location: 43426 - 43656 (+)
Gene ID: HRGMv2_0629_6_47
Type: pfam
Location: 43777 - 45081 (+)
Gene ID: HRGMv2_0629_6_48
Type: pfam
Location: 45157 - 46104 (+)
Gene ID: HRGMv2_0629_6_49
Type: TC
Location: 46300 - 47556 (+)
Gene ID: HRGMv2_0629_6_50
Type: CAZyme
Location: 47553 - 48545 (-)
Gene ID: HRGMv2_0629_6_51
Type: STP
Location: 48526 - 49305 (-)
Gene ID: HRGMv2_0629_6_52
Type: peptidase
Location: 49317 - 50585 (-)
Gene ID: HRGMv2_0629_6_53
Type: TC
Location: 50647 - 51939 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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