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Cluster: HRGMv2_0629_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0629_5 HRGMv2_0629_5_92 104583 105227 + 1.A.62.2.3
pfam HRGMv2_0629_5 HRGMv2_0629_5_93 105331 106530 + MFS_3 | MFS_1
pfam HRGMv2_0629_5 HRGMv2_0629_5_94 106636 107439 - DNA_pol_B_exo1 | DNA_pol_B_exo2 | RNase_H_2
CAZyme HRGMv2_0629_5 HRGMv2_0629_5_95 107498 108505 + GT9
pfam HRGMv2_0629_5 HRGMv2_0629_5_96 108498 109421 + Lip_A_acyltrans
CAZyme HRGMv2_0629_5 HRGMv2_0629_5_97 109418 110248 + GT2
Gene ID: HRGMv2_0629_5_92
Type: TC
Location: 104583 - 105227 (+)
Gene ID: HRGMv2_0629_5_93
Type: pfam
Location: 105331 - 106530 (+)
Gene ID: HRGMv2_0629_5_94
Type: pfam
Location: 106636 - 107439 (-)
Gene ID: HRGMv2_0629_5_95
Type: CAZyme
Location: 107498 - 108505 (+)
Gene ID: HRGMv2_0629_5_96
Type: pfam
Location: 108498 - 109421 (+)
Gene ID: HRGMv2_0629_5_97
Type: CAZyme
Location: 109418 - 110248 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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