Cluster: HRGMv2_0629_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0629
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0629_1 | HRGMv2_0629_1_169 | 176657 | 178300 | - | GH23 |
| pfam | HRGMv2_0629_1 | HRGMv2_0629_1_170 | 178300 | 178563 | - | YGGT |
| pfam | HRGMv2_0629_1 | HRGMv2_0629_1_171 | 178653 | 179792 | - | Metallophos | Metallophos_2 |
| TC | HRGMv2_0629_1 | HRGMv2_0629_1_172 | 179793 | 181112 | - | 2.A.26.1.1 |
Gene ID: HRGMv2_0629_1_169
Type: CAZyme
Location: 176657 - 178300 (-)
Type: CAZyme
Location: 176657 - 178300 (-)
Gene ID: HRGMv2_0629_1_170
Type: pfam
Location: 178300 - 178563 (-)
Type: pfam
Location: 178300 - 178563 (-)
Gene ID: HRGMv2_0629_1_171
Type: pfam
Location: 178653 - 179792 (-)
Type: pfam
Location: 178653 - 179792 (-)
Gene ID: HRGMv2_0629_1_172
Type: TC
Location: 179793 - 181112 (-)
Type: TC
Location: 179793 - 181112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter
Species
Campylobacter sp900753405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.