Cluster: HRGMv2_0629_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0629
- CGC Family ID: CGCFAM_01722
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0629_8 | HRGMv2_0629_8_56 | 53127 | 54089 | - | GT32 |
| TC | HRGMv2_0629_8 | HRGMv2_0629_8_57 | 54160 | 55485 | - | 3.A.7.9.1 |
| pfam | HRGMv2_0629_8 | HRGMv2_0629_8_58 | 55659 | 56486 | - | PDH_N | NAD_binding_2 | F420_oxidored | PDH_C |
| TC | HRGMv2_0629_8 | HRGMv2_0629_8_59 | 56615 | 58975 | + | 1.B.33.1.1 |
| TC | HRGMv2_0629_8 | HRGMv2_0629_8_60 | 59038 | 59460 | + | 9.B.27.3.1 |
Gene ID: HRGMv2_0629_8_56
Type: CAZyme
Location: 53127 - 54089 (-)
Type: CAZyme
Location: 53127 - 54089 (-)
Gene ID: HRGMv2_0629_8_57
Type: TC
Location: 54160 - 55485 (-)
Type: TC
Location: 54160 - 55485 (-)
Gene ID: HRGMv2_0629_8_58
Type: pfam
Location: 55659 - 56486 (-)
Type: pfam
Location: 55659 - 56486 (-)
Gene ID: HRGMv2_0629_8_59
Type: TC
Location: 56615 - 58975 (+)
Type: TC
Location: 56615 - 58975 (+)
Gene ID: HRGMv2_0629_8_60
Type: TC
Location: 59038 - 59460 (+)
Type: TC
Location: 59038 - 59460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter
Species
Campylobacter sp900753405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.