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Cluster: HRGMv2_0624_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0624_8 HRGMv2_0624_8_12 10607 12028 - 2.A.50.2.1
pfam HRGMv2_0624_8 HRGMv2_0624_8_13 12251 13330 - Acyl_transf_3
pfam HRGMv2_0624_8 HRGMv2_0624_8_14 13445 14356 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme HRGMv2_0624_8 HRGMv2_0624_8_15 14353 16821 - GT4 | GT4
pfam HRGMv2_0624_8 HRGMv2_0624_8_16 17120 18157 - Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
pfam HRGMv2_0624_8 HRGMv2_0624_8_17 18178 19602 - NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
CAZyme HRGMv2_0624_8 HRGMv2_0624_8_18 19652 21073 - GT4
Gene ID: HRGMv2_0624_8_12
Type: TC
Location: 10607 - 12028 (-)
Gene ID: HRGMv2_0624_8_13
Type: pfam
Location: 12251 - 13330 (-)
Gene ID: HRGMv2_0624_8_14
Type: pfam
Location: 13445 - 14356 (-)
Gene ID: HRGMv2_0624_8_15
Type: CAZyme
Location: 14353 - 16821 (-)
Gene ID: HRGMv2_0624_8_16
Type: pfam
Location: 17120 - 18157 (-)
Gene ID: HRGMv2_0624_8_17
Type: pfam
Location: 18178 - 19602 (-)
Gene ID: HRGMv2_0624_8_18
Type: CAZyme
Location: 19652 - 21073 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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