Cluster: HRGMv2_0623_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0623
- CGC Family ID: CGCFAM_00396
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0623_69 | HRGMv2_0623_69_17 | 12405 | 13133 | + | GT2 |
| pfam | HRGMv2_0623_69 | HRGMv2_0623_69_18 | 13130 | 14125 | + | Lip_A_acyltrans |
| pfam | HRGMv2_0623_69 | HRGMv2_0623_69_19 | 14119 | 14724 | + | LolA | LolA_3 |
| TC | HRGMv2_0623_69 | HRGMv2_0623_69_20 | 14733 | 17015 | + | 2.A.6.8.2 |
Gene ID: HRGMv2_0623_69_17
Type: CAZyme
Location: 12405 - 13133 (+)
Type: CAZyme
Location: 12405 - 13133 (+)
Gene ID: HRGMv2_0623_69_18
Type: pfam
Location: 13130 - 14125 (+)
Type: pfam
Location: 13130 - 14125 (+)
Gene ID: HRGMv2_0623_69_19
Type: pfam
Location: 14119 - 14724 (+)
Type: pfam
Location: 14119 - 14724 (+)
Gene ID: HRGMv2_0623_69_20
Type: TC
Location: 14733 - 17015 (+)
Type: TC
Location: 14733 - 17015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Aphodousia
Species
Aphodousia sp019418235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.