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Cluster: HRGMv2_0622_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0622_2 HRGMv2_0622_2_33 40932 41414 - 9.B.156.1.1
TC HRGMv2_0622_2 HRGMv2_0622_2_34 41407 42111 - 9.A.5.4.2
NULL(UNKNOWN) HRGMv2_0622_2 HRGMv2_0622_2_35 42622 42801 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0622_2 HRGMv2_0622_2_36 43363 44913 + 2.A.35.2.1
NULL(UNKNOWN) HRGMv2_0622_2 HRGMv2_0622_2_37 45482 45787 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0622_2 HRGMv2_0622_2_38 46009 48105 + 3.A.3.32.7
pfam HRGMv2_0622_2 HRGMv2_0622_2_39 48102 48584 + HMA_2
NULL(UNKNOWN) HRGMv2_0622_2 HRGMv2_0622_2_40 48651 49016 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0622_2 HRGMv2_0622_2_41 49252 51108 + 4.C.1.1.14
TC HRGMv2_0622_2 HRGMv2_0622_2_42 51114 52970 + 4.C.1.1.14
pfam HRGMv2_0622_2 HRGMv2_0622_2_43 52975 53784 + TatD_DNase
pfam HRGMv2_0622_2 HRGMv2_0622_2_44 53877 54593 + Ank | Ank | Ank | Ank_2 | Ank_2 | Ank_3 | Ank_4 | Ank_4 | Ank_5
CAZyme HRGMv2_0622_2 HRGMv2_0622_2_45 54842 55813 + GT2
CAZyme HRGMv2_0622_2 HRGMv2_0622_2_46 55832 56584 - GT25
pfam HRGMv2_0622_2 HRGMv2_0622_2_47 56632 57435 - DHquinase_I
peptidase HRGMv2_0622_2 HRGMv2_0622_2_48 57473 58240 - C26.UPW
CAZyme HRGMv2_0622_2 HRGMv2_0622_2_49 58253 59410 - GT9
Gene ID: HRGMv2_0622_2_33
Type: TC
Location: 40932 - 41414 (-)
Gene ID: HRGMv2_0622_2_34
Type: TC
Location: 41407 - 42111 (-)
Gene ID: HRGMv2_0622_2_35
Type:
Location: 42622 - 42801 (-)
Gene ID: HRGMv2_0622_2_36
Type: TC
Location: 43363 - 44913 (+)
Gene ID: HRGMv2_0622_2_37
Type:
Location: 45482 - 45787 (+)
Gene ID: HRGMv2_0622_2_38
Type: TC
Location: 46009 - 48105 (+)
Gene ID: HRGMv2_0622_2_39
Type: pfam
Location: 48102 - 48584 (+)
Gene ID: HRGMv2_0622_2_40
Type:
Location: 48651 - 49016 (+)
Gene ID: HRGMv2_0622_2_41
Type: TC
Location: 49252 - 51108 (+)
Gene ID: HRGMv2_0622_2_42
Type: TC
Location: 51114 - 52970 (+)
Gene ID: HRGMv2_0622_2_43
Type: pfam
Location: 52975 - 53784 (+)
Gene ID: HRGMv2_0622_2_44
Type: pfam
Location: 53877 - 54593 (+)
Gene ID: HRGMv2_0622_2_45
Type: CAZyme
Location: 54842 - 55813 (+)
Gene ID: HRGMv2_0622_2_46
Type: CAZyme
Location: 55832 - 56584 (-)
Gene ID: HRGMv2_0622_2_47
Type: pfam
Location: 56632 - 57435 (-)
Gene ID: HRGMv2_0622_2_48
Type: peptidase
Location: 57473 - 58240 (-)
Gene ID: HRGMv2_0622_2_49
Type: CAZyme
Location: 58253 - 59410 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0622_2_44 vegetarian > vegan 19.76009 0.00367

🧭 Explore Read Mapping of CGC

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