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Cluster: HRGMv2_0621_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0621_4 HRGMv2_0621_4_115 124936 127392 - GT35
CAZyme HRGMv2_0621_4 HRGMv2_0621_4_116 127594 129078 - GT5
pfam HRGMv2_0621_4 HRGMv2_0621_4_117 129079 130380 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0621_4 HRGMv2_0621_4_118 130568 132193 - PGM_PMM_I | PGM_PMM_II | PGM_PMM_III | PGM1_C_vert_fung
CAZyme HRGMv2_0621_4 HRGMv2_0621_4_119 132293 134335 - GH13_11
CAZyme HRGMv2_0621_4 HRGMv2_0621_4_120 134335 136515 - CBM48 | GH13_9
sulfatase HRGMv2_0621_4 HRGMv2_0621_4_121 136655 138334 - S1_6
pfam HRGMv2_0621_4 HRGMv2_0621_4_122 138449 138868 + 4HBT | 4HBT_2
TC HRGMv2_0621_4 HRGMv2_0621_4_123 139176 140393 + 2.A.1.2.7
Gene ID: HRGMv2_0621_4_115
Type: CAZyme
Location: 124936 - 127392 (-)
Gene ID: HRGMv2_0621_4_116
Type: CAZyme
Location: 127594 - 129078 (-)
Gene ID: HRGMv2_0621_4_117
Type: pfam
Location: 129079 - 130380 (-)
Gene ID: HRGMv2_0621_4_118
Type: pfam
Location: 130568 - 132193 (-)
Gene ID: HRGMv2_0621_4_119
Type: CAZyme
Location: 132293 - 134335 (-)
Gene ID: HRGMv2_0621_4_120
Type: CAZyme
Location: 134335 - 136515 (-)
Gene ID: HRGMv2_0621_4_121
Type: sulfatase
Location: 136655 - 138334 (-)
Gene ID: HRGMv2_0621_4_122
Type: pfam
Location: 138449 - 138868 (+)
Gene ID: HRGMv2_0621_4_123
Type: TC
Location: 139176 - 140393 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0621_4_118 vegetarian > vegan 1.58424 0.04112
HRGMv2_0621_4_122 vegetarian > vegan 1.22980 0.04112

🧭 Explore Read Mapping of CGC

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