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Cluster: HRGMv2_0621_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0621_6 HRGMv2_0621_6_45 56288 58075 + GH15
TC HRGMv2_0621_6 HRGMv2_0621_6_46 58132 59172 + 8.A.5.1.4
TC HRGMv2_0621_6 HRGMv2_0621_6_47 59320 60297 + 8.A.5.1.4
TC HRGMv2_0621_6 HRGMv2_0621_6_48 60431 61426 + 8.A.5.1.4
TC HRGMv2_0621_6 HRGMv2_0621_6_49 61488 61802 - 2.A.7.1.10
Gene ID: HRGMv2_0621_6_45
Type: CAZyme
Location: 56288 - 58075 (+)
Gene ID: HRGMv2_0621_6_46
Type: TC
Location: 58132 - 59172 (+)
Gene ID: HRGMv2_0621_6_47
Type: TC
Location: 59320 - 60297 (+)
Gene ID: HRGMv2_0621_6_48
Type: TC
Location: 60431 - 61426 (+)
Gene ID: HRGMv2_0621_6_49
Type: TC
Location: 61488 - 61802 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0621_6_47 vegetarian > vegan 1.31568 0.04112

🧭 Explore Read Mapping of CGC

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