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Cluster: HRGMv2_0621_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0621_6 HRGMv2_0621_6_2 1784 3349 + 8.A.1.6.2
TC HRGMv2_0621_6 HRGMv2_0621_6_3 3365 6466 + 2.A.6.2.39
TC HRGMv2_0621_6 HRGMv2_0621_6_4 6479 9577 + 2.A.6.2.12
TC HRGMv2_0621_6 HRGMv2_0621_6_5 9600 11198 + 2.A.6.2.39
CAZyme HRGMv2_0621_6 HRGMv2_0621_6_6 12406 14634 + CE4 | GH153
CAZyme HRGMv2_0621_6 HRGMv2_0621_6_7 14647 15966 + GT2
Gene ID: HRGMv2_0621_6_2
Type: TC
Location: 1784 - 3349 (+)
Gene ID: HRGMv2_0621_6_3
Type: TC
Location: 3365 - 6466 (+)
Gene ID: HRGMv2_0621_6_4
Type: TC
Location: 6479 - 9577 (+)
Gene ID: HRGMv2_0621_6_5
Type: TC
Location: 9600 - 11198 (+)
Gene ID: HRGMv2_0621_6_6
Type: CAZyme
Location: 12406 - 14634 (+)
Gene ID: HRGMv2_0621_6_7
Type: CAZyme
Location: 14647 - 15966 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0621_6_6 vegetarian > vegan 1.70386 0.04112
HRGMv2_0621_6_7 vegetarian > vegan 2.27507 0.04112

🧭 Explore Read Mapping of CGC

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